CDS

Accession Number TCMCG017C32968
gbkey CDS
Protein Id OMO56142.1
Location join(10023..10106,10217..10387,10474..10668,10849..11178,11319..11702)
GeneID InterPro:IPR009080
Organism Corchorus olitorius
locus_tag COLO4_35768

Protein

Length 387aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022790.1
Definition Aminoacyl-tRNA synthetase, class 1a, anticodon-binding protein [Corchorus olitorius]
Locus_tag COLO4_35768

EGGNOG-MAPPER Annotation

COG_category J
Description cysteine--tRNA ligase
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03650        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01883        [VIEW IN KEGG]
EC 6.1.1.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004817        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006423        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTAATCTCCAGTGCCTCCCTCCTACCCATGAGCCACGTGTATCTAAACACATGGACCAGATCAGAAATATGATAGCTCAGATTATCGAAAAGGACTTGGGATATGTAGTTGATGGGGATGTGTTTTTTGCTGTGGATAAATTCCCAGATTATGGCAAATTGTCTGGGCAAAAGCAGGAAAATAATAGAGCTGGTGAACGAGTTGCCGTTGACTCGAGAAAACGCAATCCTTCCGACTTTGCATTATGGAAGGCAGCAAAGGCAGGTGAGCCATCTTGGGAGAGCGAATGGGGACGTGGAAGACCTGGATGGCACATCGAATGCAGTGCAATGAGTGAACGTTATTTAAGCTCCAGATTTGACATTCATGGTGGTGGGCTTGATTTGATTTTCCCTCATCATGAAAATGAGATTGCTCAGAGTTGTGCTGCATCGGAAGACAGTGATATTACTGAAAGATACCATCCACTGGCTTTGAGATACTTCTTGATAAATGCACACTACCGTTCTCCCCTCAATTACTCTGTGCTGCAGCTGGAAGCTGCATCAGAAGCTGTTTTTTATATATATCAGACATTGAAAGATTGTGATGATGCCCTATCACAGCTCCAGGAAGAGTACTGCATCAAGGATGGCGAACAACCTCAGACTCCTTCAGAGACTCCTTCAGATGACAAAAAATGCATTGATCTACAGGGTGAATTCAAGGCTAACATGTCAGATGACTTGAACACTCCACTTTTTCTGACTGGGGCCTTTCTTGACGCTTTAAAGATTAAGAAGCAACAAAAGCAACAGCGCTTATTATCTATTCAATCCCTTATAGAAGTTGAAAAAGAAGTTAAGAAAGTTCTTGATGTTCTGGGAATGCTGCCACCCTACTCTTATGCTGAGGTTTTGCAGCAATCAAAGGATAAGGCCTTAAAAAGAGCAGGGCTGACAGAAGATGACATGTTGCGTATAATTGATGAAAGAGTGGAAGCGAGGAAAAACAAAGATTTCTTGAGAAGTGATCAGATTCGAGCTGAATTGCAACAAAAGGGCATTGCACTCATGGATATAGGCACAGAAACAACTTGGCGACCTTGTGTTCCTGTTCAACCAGAACCCGAAATAGTTGCAGTAGGAGAGCCAAAGGCACCTGCTGAATCTGCAGAATAA
Protein:  
MANLQCLPPTHEPRVSKHMDQIRNMIAQIIEKDLGYVVDGDVFFAVDKFPDYGKLSGQKQENNRAGERVAVDSRKRNPSDFALWKAAKAGEPSWESEWGRGRPGWHIECSAMSERYLSSRFDIHGGGLDLIFPHHENEIAQSCAASEDSDITERYHPLALRYFLINAHYRSPLNYSVLQLEAASEAVFYIYQTLKDCDDALSQLQEEYCIKDGEQPQTPSETPSDDKKCIDLQGEFKANMSDDLNTPLFLTGAFLDALKIKKQQKQQRLLSIQSLIEVEKEVKKVLDVLGMLPPYSYAEVLQQSKDKALKRAGLTEDDMLRIIDERVEARKNKDFLRSDQIRAELQQKGIALMDIGTETTWRPCVPVQPEPEIVAVGEPKAPAESAE